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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902345.1_cds_XP_016452370.1_46620
CDS Infomation

[gene=LOC107776929] [db_xref=GeneID:107776929] [protein=probable prolyl 4-hydroxylase 6] [protein_id=XP_016452370.1] [location=join(132128..132243,132337..132429,132529..132586,133164..133268,134389..134446,134549..134724,134830..134890,135824..136113)] [gbkey=CDS]
Sequence

ATGGACCGTCAACTTTTTCTTCTTCTTTTATTTTCTCTCTGTTTCCTTTCCATTTTTCCT
GATCTGTCTCGTTCGACTTCTCTTCGATTCTCCGGTTGGCATAATGATAAAAAAACAAAA
TCGTCGGTGCTGAAATTGCTGACTGACCGTTCGTCTTCGTCCCCTACAATTGATCCGACC
CGGGTTACCCAAATCTCCTGGCGCCCAAGGGCTTTTGTATATAGGAACTTTTTGACAGAT
GAGGAATGTGATCATTTCATCACCCTGGCTAAACATAAGCTGGAGAAATCCATGGTGGCT
GACAATGAATCAGGAAAAAGCGTTGAGAGTGAAGTTCGGACAAGCTCTGGCATGTTTTTT
AGAAAGGCCCAGGATCAAGTAGTTGCTAATGTGGAGGCTAGGATAGCTGCCTGGACGTTT
CTTCCTGAAGAGAATGGGGAATCTATTCAGATATTGCATTACGAACATGGCCAAAAATAC
GAGCCACATTTTGATTATTTTCATGACAAAGTCAATCAAGAGCTAGGCGGTCATCGGGTG
GCTACTGTTCTTATGTATTTATCTGATGTTGAGAAGGGTGGGGAAACAGTTTTTCCTAAT
TCAGAGGCAAAAAAAACTCAGGCAAAGGGTGATGACTGGTCTGATTGTGCTAAAAAAGGA
TATGCAGTAAAACCTAGGAAGGGTGATGCATTGTTGTTTTTCAGCCTACATCCCGATGCA
ACAACTGATCCTCTAAGCTTGCATGGAAGCTGCCCTGTTATTGAAGGTGAGAAGTGGTCT
GCTACAAAGTGGATTCATGTGAGATCCTTTGAGACAACATCAAGTGTTTGTAAGGATCAG
AATCCGAACTGCCCCCAGTGGGCTACTGCTGGTGAATGTGAAAAGAATCCTCTATACATG
ATGGGTTCTGAAGATTCTGTAGGTCATTGTAGGAAGAGCTGCAAGGTTTGCTCCTGA

Peptide Sequence

PEP ID

XP_016452370.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 6 [Nicotiana tabacum]
Sequence

MDRQLFLLLLFSLCFLSIFPDLSRSTSLRFSGWHNDKKTKSSVLKLLTDRSSSSPTIDPT
RVTQISWRPRAFVYRNFLTDEECDHFITLAKHKLEKSMVADNESGKSVESEVRTSSGMFF
RKAQDQVVANVEARIAAWTFLPEENGESIQILHYEHGQKYEPHFDYFHDKVNQELGGHRV
ATVLMYLSDVEKGGETVFPNSEAKKTQAKGDDWSDCAKKGYAVKPRKGDALLFFSLHPDA
TTDPLSLHGSCPVIEGEKWSATKWIHVRSFETTSSVCKDQNPNCPQWATAGECEKNPLYM
MGSEDSVGHCRKSCKVCS

Transcript Sequence

Gene sequence data has not been registered.